<?xml version="1.0" encoding="UTF-8"?>
<metabolite>
  <version>1.0</version>
  <creation_date>2016-09-30 22:46:02 UTC</creation_date>
  <update_date>2020-05-11 20:44:46 UTC</update_date>
  <accession>BMDB0001442</accession>
  <secondary_accessions>
    <accession>BMDB01442</accession>
  </secondary_accessions>
  <name>Prostaglandin E1</name>
  <description/>
  <synonyms>
    <synonym>(11alpha,13E,15S)-11,15-Dihydroxy-9-oxoprost-13-en-1-Oic acid</synonym>
    <synonym>(13E)-(15S)-11alpha,15-Dihydroxy-9-oxoprost-13-enoate</synonym>
    <synonym>11alpha,15alpha-Dihydroxy-9-oxo-13-trans-prostenoic acid</synonym>
    <synonym>Alprostadil</synonym>
    <synonym>Alprostadilum</synonym>
    <synonym>Befar</synonym>
    <synonym>Caverject</synonym>
    <synonym>Edex</synonym>
    <synonym>Muse</synonym>
    <synonym>PGE-1</synonym>
    <synonym>PGE1</synonym>
    <synonym>Prostin VR</synonym>
    <synonym>Prostin VR pediatric</synonym>
    <synonym>(11a,13E,15S)-11,15-Dihydroxy-9-oxoprost-13-en-1-Oate</synonym>
    <synonym>(11a,13E,15S)-11,15-Dihydroxy-9-oxoprost-13-en-1-Oic acid</synonym>
    <synonym>(11alpha,13E,15S)-11,15-Dihydroxy-9-oxoprost-13-en-1-Oate</synonym>
    <synonym>(11Α,13E,15S)-11,15-dihydroxy-9-oxoprost-13-en-1-Oate</synonym>
    <synonym>(11Α,13E,15S)-11,15-dihydroxy-9-oxoprost-13-en-1-Oic acid</synonym>
    <synonym>(13E)-(15S)-11a,15-Dihydroxy-9-oxoprost-13-enoate</synonym>
    <synonym>(13E)-(15S)-11a,15-Dihydroxy-9-oxoprost-13-enoic acid</synonym>
    <synonym>(13E)-(15S)-11alpha,15-Dihydroxy-9-oxoprost-13-enoic acid</synonym>
    <synonym>(13E)-(15S)-11Α,15-dihydroxy-9-oxoprost-13-enoate</synonym>
    <synonym>(13E)-(15S)-11Α,15-dihydroxy-9-oxoprost-13-enoic acid</synonym>
    <synonym>11a,15a-Dihydroxy-9-oxo-13-trans-prostenoate</synonym>
    <synonym>11a,15a-Dihydroxy-9-oxo-13-trans-prostenoic acid</synonym>
    <synonym>11alpha,15alpha-Dihydroxy-9-oxo-13-trans-prostenoate</synonym>
    <synonym>11Α,15α-dihydroxy-9-oxo-13-trans-prostenoate</synonym>
    <synonym>11Α,15α-dihydroxy-9-oxo-13-trans-prostenoic acid</synonym>
    <synonym>Abbott brand OF alprostadil</synonym>
    <synonym>Minprog</synonym>
    <synonym>Paladin brand OF alprostadil</synonym>
    <synonym>Prostaglandin e1alpha</synonym>
    <synonym>Schwarz pharma brand OF alprostadil</synonym>
    <synonym>Astra brand OF alprostadil</synonym>
    <synonym>Hoyer brand OF alprostadil</synonym>
    <synonym>Sugiran</synonym>
    <synonym>Allphar brand OF alprostadil</synonym>
    <synonym>AstraZeneca brand OF alprostadil</synonym>
    <synonym>lipo PGE1</synonym>
    <synonym>Viridal</synonym>
    <synonym>lipo-PGE1</synonym>
    <synonym>Vasaprostan</synonym>
    <synonym>Janssen brand OF alprostadil</synonym>
    <synonym>PGE1alpha</synonym>
    <synonym>Pharmacia brand 1 OF alprostadil</synonym>
    <synonym>Prostavasin</synonym>
    <synonym>Prostine VR</synonym>
    <synonym>Pharmacia brand 2 OF alprostadil</synonym>
    <synonym>Prostaglandin e1</synonym>
    <synonym>Schwarz brand OF alprostadil</synonym>
    <synonym>Vivus brand OF alprostadil</synonym>
    <synonym>Prink</synonym>
    <synonym>Vitaros</synonym>
    <synonym>Caverject impulse</synonym>
    <synonym>U-10136prostin</synonym>
    <synonym>U-10136alprostadil</synonym>
    <synonym>(+)-3-Hydroxy-2-(3-hydroxy-1-octenyl)-5-oxo-cyclopentaneheptanoate</synonym>
    <synonym>(+)-3-Hydroxy-2-(3-hydroxy-1-octenyl)-5-oxo-cyclopentaneheptanoic acid</synonym>
    <synonym>(-)-3-Hydroxy-2-(3-hydroxy-1-octenyl)-5-oxo-cyclopentaneheptanoate</synonym>
    <synonym>(-)-3-Hydroxy-2-(3-hydroxy-1-octenyl)-5-oxo-cyclopentaneheptanoic acid</synonym>
    <synonym>(-)-Prostaglandin e1</synonym>
    <synonym>(13E)-(15S)-11,15-Dihydroxy-9-oxoprost-13-enoate</synonym>
    <synonym>(13E)-(15S)-11,15-Dihydroxy-9-oxoprost-13-enoic acid</synonym>
    <synonym>(13E)-(15S)-11-alpha,15-Dihydroxy-9-oxoprost-13-enoate</synonym>
    <synonym>(13E)-(15S)-11-alpha,15-Dihydroxy-9-oxoprost-13-enoic acid</synonym>
    <synonym>11,15-Dihydroxy-9-oxoprost-13-en-1-Oate</synonym>
    <synonym>11,15-Dihydroxy-9-oxoprost-13-en-1-Oic acid</synonym>
    <synonym>11,15-Dihydroxy-9-oxoprost-13-en-1-Oic acid (acd/name 4.0)</synonym>
    <synonym>3-Hydroxy-2-(3-hydroxy-1-octenyl)-5-oxo-cyclopentaneheptanoate</synonym>
    <synonym>3-Hydroxy-2-(3-hydroxy-1-octenyl)-5-oxo-cyclopentaneheptanoic acid</synonym>
    <synonym>Alprostadil prostoglandin e1</synonym>
    <synonym>Alprostadil(usan)</synonym>
    <synonym>L-Prostaglandin e1</synonym>
  </synonyms>
  <chemical_formula>C20H34O5</chemical_formula>
  <average_molecular_weight>354.487</average_molecular_weight>
  <monisotopic_moleculate_weight>354.240624195</monisotopic_moleculate_weight>
  <iupac_name>7-[(1R,2R,3R)-3-hydroxy-2-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-5-oxocyclopentyl]heptanoic acid</iupac_name>
  <traditional_iupac>alprostadil</traditional_iupac>
  <cas_registry_number>745-65-3</cas_registry_number>
  <smiles>CCCCC[C@H](O)\C=C\[C@H]1[C@H](O)CC(=O)[C@@H]1CCCCCCC(O)=O</smiles>
  <inchi>InChI=1S/C20H34O5/c1-2-3-6-9-15(21)12-13-17-16(18(22)14-19(17)23)10-7-4-5-8-11-20(24)25/h12-13,15-17,19,21,23H,2-11,14H2,1H3,(H,24,25)/b13-12+/t15-,16+,17+,19+/m0/s1</inchi>
  <inchikey>GMVPRGQOIOIIMI-DWKJAMRDSA-N</inchikey>
  <taxonomy>
    <description> belongs to the class of organic compounds known as prostaglandins and related compounds. These are unsaturated carboxylic acids consisting of a 20 carbon skeleton that also contains a five member ring, and are based upon the fatty acid arachidonic acid.</description>
    <kingdom>Organic compounds</kingdom>
    <super_class>Lipids and lipid-like molecules</super_class>
    <class>Fatty Acyls</class>
    <sub_class>Eicosanoids</sub_class>
    <direct_parent>Prostaglandins and related compounds</direct_parent>
    <alternative_parents>
      <alternative_parent>Carboxylic acids</alternative_parent>
      <alternative_parent>Cyclic alcohols and derivatives</alternative_parent>
      <alternative_parent>Cyclic ketones</alternative_parent>
      <alternative_parent>Cyclopentanols</alternative_parent>
      <alternative_parent>Fatty alcohols</alternative_parent>
      <alternative_parent>Hydrocarbon derivatives</alternative_parent>
      <alternative_parent>Hydroxy fatty acids</alternative_parent>
      <alternative_parent>Long-chain fatty acids</alternative_parent>
      <alternative_parent>Monocarboxylic acids and derivatives</alternative_parent>
      <alternative_parent>Organic oxides</alternative_parent>
    </alternative_parents>
    <substituents>
      <substituent>Alcohol</substituent>
      <substituent>Aliphatic homomonocyclic compound</substituent>
      <substituent>Carbonyl group</substituent>
      <substituent>Carboxylic acid</substituent>
      <substituent>Carboxylic acid derivative</substituent>
      <substituent>Cyclic alcohol</substituent>
      <substituent>Cyclic ketone</substituent>
      <substituent>Cyclopentanol</substituent>
      <substituent>Fatty alcohol</substituent>
      <substituent>Hydrocarbon derivative</substituent>
      <substituent>Hydroxy fatty acid</substituent>
      <substituent>Ketone</substituent>
      <substituent>Long-chain fatty acid</substituent>
      <substituent>Monocarboxylic acid or derivatives</substituent>
      <substituent>Organic oxide</substituent>
      <substituent>Organic oxygen compound</substituent>
      <substituent>Organooxygen compound</substituent>
      <substituent>Prostaglandin skeleton</substituent>
      <substituent>Secondary alcohol</substituent>
    </substituents>
    <molecular_framework>Aliphatic homomonocyclic compounds</molecular_framework>
    <external_descriptors>
      <external_descriptor>Prostaglandins</external_descriptor>
      <external_descriptor>Prostaglandins</external_descriptor>
      <external_descriptor>prostaglandins E</external_descriptor>
    </external_descriptors>
  </taxonomy>
  <experimental_properties>
    <state>Solid</state>
  </experimental_properties>
  <predicted_properties>
    <property>
      <kind>logp</kind>
      <value>3.59</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>pka_strongest_acidic</kind>
      <value>4.35</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>pka_strongest_basic</kind>
      <value>-1.6</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>iupac</kind>
      <value>7-[(1R,2R,3R)-3-hydroxy-2-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-5-oxocyclopentyl]heptanoic acid</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>average_mass</kind>
      <value>354.487</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>mono_mass</kind>
      <value>354.240624195</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>smiles</kind>
      <value>CCCCC[C@H](O)\C=C\[C@H]1[C@H](O)CC(=O)[C@@H]1CCCCCCC(O)=O</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>formula</kind>
      <value>C20H34O5</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>inchi</kind>
      <value>InChI=1S/C20H34O5/c1-2-3-6-9-15(21)12-13-17-16(18(22)14-19(17)23)10-7-4-5-8-11-20(24)25/h12-13,15-17,19,21,23H,2-11,14H2,1H3,(H,24,25)/b13-12+/t15-,16+,17+,19+/m0/s1</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>inchikey</kind>
      <value>GMVPRGQOIOIIMI-DWKJAMRDSA-N</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>polar_surface_area</kind>
      <value>94.83</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>refractivity</kind>
      <value>98.32</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>polarizability</kind>
      <value>42.13</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>rotatable_bond_count</kind>
      <value>13</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>acceptor_count</kind>
      <value>5</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>donor_count</kind>
      <value>3</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>physiological_charge</kind>
      <value>-1</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>formal_charge</kind>
      <value>0</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>number_of_rings</kind>
      <value>1</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>bioavailability</kind>
      <value>1</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>rule_of_five</kind>
      <value>Yes</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>ghose_filter</kind>
      <value>Yes</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>veber_rule</kind>
      <value>Yes</value>
      <source>ChemAxon</source>
    </property>
    <property>
      <kind>mddr_like_rule</kind>
      <value>Yes</value>
      <source>ChemAxon</source>
    </property>
  </predicted_properties>
  <pathways>
  </pathways>
  <spectra>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>150409</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>50532</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>50533</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>50534</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>145797</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>145798</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>145799</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>2245518</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>2375753</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>2375754</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>2375755</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>2559996</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>2559997</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>2559998</spectrum_id>
    </spectrum>
  </spectra>
  <normal_concentrations>
    <concentration>
      <biospecimen>Epidermis</biospecimen>
      <concentration_value/>
      <concentration_units/>
      <references>
        <reference>
          <reference_text>Wishart DS, Feunang YD, Marcu A, Guo AC, Liang K, Vazquez-Fresno R, Sajed T, Johnson D, Li C, Karu N, Sayeeda Z, Lo E, Assempour N, Berjanskii M, Singhal S, Arndt D, Liang Y, Badran H, Grant J, Serra-Cayuela A, Liu Y, Mandal R, Neveu V, Pon A, Knox C, Wilson M, Manach C, Scalbert A: HMDB 4.0: the human metabolome database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D608-D617. doi: 10.1093/nar/gkx1089.</reference_text>
          <pubmed_id>29140435</pubmed_id>
        </reference>
      </references>
    </concentration>
    <concentration>
      <biospecimen>Fibroblasts</biospecimen>
      <concentration_value/>
      <concentration_units/>
      <references>
        <reference>
          <reference_text>Wishart DS, Feunang YD, Marcu A, Guo AC, Liang K, Vazquez-Fresno R, Sajed T, Johnson D, Li C, Karu N, Sayeeda Z, Lo E, Assempour N, Berjanskii M, Singhal S, Arndt D, Liang Y, Badran H, Grant J, Serra-Cayuela A, Liu Y, Mandal R, Neveu V, Pon A, Knox C, Wilson M, Manach C, Scalbert A: HMDB 4.0: the human metabolome database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D608-D617. doi: 10.1093/nar/gkx1089.</reference_text>
          <pubmed_id>29140435</pubmed_id>
        </reference>
      </references>
    </concentration>
    <concentration>
      <biospecimen>Kidney</biospecimen>
      <concentration_value/>
      <concentration_units/>
      <references>
        <reference>
          <reference_text>Wishart DS, Feunang YD, Marcu A, Guo AC, Liang K, Vazquez-Fresno R, Sajed T, Johnson D, Li C, Karu N, Sayeeda Z, Lo E, Assempour N, Berjanskii M, Singhal S, Arndt D, Liang Y, Badran H, Grant J, Serra-Cayuela A, Liu Y, Mandal R, Neveu V, Pon A, Knox C, Wilson M, Manach C, Scalbert A: HMDB 4.0: the human metabolome database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D608-D617. doi: 10.1093/nar/gkx1089.</reference_text>
          <pubmed_id>29140435</pubmed_id>
        </reference>
      </references>
    </concentration>
    <concentration>
      <biospecimen>Liver</biospecimen>
      <concentration_value/>
      <concentration_units/>
      <comment>Metabolomics analysis was performed using GC-MS/LC-MS in multiparous Holstein dairy cows</comment>
      <references>
        <reference>
          <reference_text>Shahzad K, Lopreiato V, Liang Y, Trevisi E, Osorio JS, Xu C, Loor JJ: Hepatic metabolomics and transcriptomics to study susceptibility to ketosis in response to prepartal nutritional management. J Anim Sci Biotechnol. 2019 Dec 18;10:96. doi: 10.1186/s40104-019-0404-z. eCollection 2019.</reference_text>
          <pubmed_id>31867104</pubmed_id>
        </reference>
      </references>
    </concentration>
    <concentration>
      <biospecimen>Neuron</biospecimen>
      <concentration_value/>
      <concentration_units/>
      <references>
        <reference>
          <reference_text>Wishart DS, Feunang YD, Marcu A, Guo AC, Liang K, Vazquez-Fresno R, Sajed T, Johnson D, Li C, Karu N, Sayeeda Z, Lo E, Assempour N, Berjanskii M, Singhal S, Arndt D, Liang Y, Badran H, Grant J, Serra-Cayuela A, Liu Y, Mandal R, Neveu V, Pon A, Knox C, Wilson M, Manach C, Scalbert A: HMDB 4.0: the human metabolome database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D608-D617. doi: 10.1093/nar/gkx1089.</reference_text>
          <pubmed_id>29140435</pubmed_id>
        </reference>
      </references>
    </concentration>
    <concentration>
      <biospecimen>Placenta</biospecimen>
      <concentration_value/>
      <concentration_units/>
      <references>
        <reference>
          <reference_text>Wishart DS, Feunang YD, Marcu A, Guo AC, Liang K, Vazquez-Fresno R, Sajed T, Johnson D, Li C, Karu N, Sayeeda Z, Lo E, Assempour N, Berjanskii M, Singhal S, Arndt D, Liang Y, Badran H, Grant J, Serra-Cayuela A, Liu Y, Mandal R, Neveu V, Pon A, Knox C, Wilson M, Manach C, Scalbert A: HMDB 4.0: the human metabolome database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D608-D617. doi: 10.1093/nar/gkx1089.</reference_text>
          <pubmed_id>29140435</pubmed_id>
        </reference>
      </references>
    </concentration>
    <concentration>
      <biospecimen>Platelet</biospecimen>
      <concentration_value/>
      <concentration_units/>
      <references>
        <reference>
          <reference_text>Wishart DS, Feunang YD, Marcu A, Guo AC, Liang K, Vazquez-Fresno R, Sajed T, Johnson D, Li C, Karu N, Sayeeda Z, Lo E, Assempour N, Berjanskii M, Singhal S, Arndt D, Liang Y, Badran H, Grant J, Serra-Cayuela A, Liu Y, Mandal R, Neveu V, Pon A, Knox C, Wilson M, Manach C, Scalbert A: HMDB 4.0: the human metabolome database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D608-D617. doi: 10.1093/nar/gkx1089.</reference_text>
          <pubmed_id>29140435</pubmed_id>
        </reference>
      </references>
    </concentration>
  </normal_concentrations>
  <foodb_id/>
  <kegg_id>C04741</kegg_id>
  <chemspider_id>4444306</chemspider_id>
  <pubchem_compound_id>5280723</pubchem_compound_id>
  <drugbank_id/>
  <pdbe_id/>
  <chebi_id>15544</chebi_id>
  <phenol_explorer_compound_id/>
  <knapsack_id/>
  <meta_cyc_id/>
  <bigg_id/>
  <wikipedia_id>Prostaglandin_E1</wikipedia_id>
  <metlin_id/>
  <synthesis_reference>Liang, Yong-tao; Wei, Feng-ping; Li, Gui-ying; Wang, En-si.  Chemoenzymic synthesis of prostaglandin E1.    Jilin Daxue Ziran Kexue Xuebao  (2001),   (2),  77-80.</synthesis_reference>
  <general_references>
  </general_references>
  <protein_associations>
  </protein_associations>
</metabolite>
